Browse reusable Agent Skills, each with a clear purpose and practical guidance.
Search biomedical literature from PubMed and bioRxiv for research papers. Use this skill when: (1) Finding research papers on a specific topic or disease, (2) Retrieving recent preprints from bioRxiv, (3) Getting paper titles, abstracts, and metadata, (4) Literature review for drug discovery or biomedical research.
Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, and integrate with scanpy/PyTorch for population-scale single-cell analysis. Use this skill when: (1) Querying single-cell expression data by cell type, tissue, or disease, (2) Exploring available single-cell datasets and metadata, (3) Training machine learning models on single-cell data, (4) Performing large-scale cross-dataset analyses.
Query ChEMBL database for bioactivity data on drug-like compounds. Use this skill when: (1) Finding compounds active against a protein target (target-based search), (2) Getting bioactivity profile for a molecule (molecule-based search), (3) Finding drugs for a disease indication (indication-based search).
面向生物医药问答场景的“疾病到创新药综合分析”技能。用于回答“某疾病有哪些创新药/前沿药/在研药/新机制药”等问题，输出疾病-靶点-药物-临床进展-机制趋势的一体化证据报告。适用于联合本地数据库适配代码与公开数据库 API（ChEMBL、ClinicalTrials、Search）进行多数据库查询、去重归一、创新性筛选与结构化报告生成的任务。
Analyze potential drug-drug interactions (DDI) for up to 5 drugs using KEGG DDI database. Use this skill when: (1) Checking interactions between multiple medications, (2) Assessing DDI risk for drug combinations, (3) Understanding interaction mechanisms and severity, (4) Analyzing CYP enzyme involvement in DDIs.
Query KEGG database for drug information, pathway analysis, and disease-drug-target discovery. Use this skill when: (1) Looking up drug information including efficacy, targets, metabolism, and interactions, (2) Analyzing metabolic or signaling pathways to retrieve genes, compounds, and modules, (3) Discovering disease-associated drugs, genes, and pathways for drug repurposing.
Query a molecule's biochemical significance and roles in biology and chemistry using BioT5 multi-modal model. Use this skill when: (1) Understanding a molecule's biological roles and functions, (2) Describing a molecule's chemical significance and applications, (3) Getting natural language explanations of molecular properties, (4) Summarizing what a molecule is used for or its metabolic relevance.
Predict protein function and properties from amino acid sequence using BioT5. Use this skill when: (1) You have a protein sequence and want to understand its biological function, (2) You need to identify enzyme activity, pathway involvement, or molecular interactions, (3) You want a concise description of protein properties from sequence alone.
Analyze protein-ligand interactions in PDB structures using PLIP (Protein-Ligand Interaction Profiler). Use this skill when: (1) Analyzing binding interactions from a PDB structure file, (2) Identifying hydrogen bonds, hydrophobic contacts, π-stacking, salt bridges, and water bridges, (3) Generating 3D visualizations of protein-ligand complexes, (4) Creating interaction summary reports for drug discovery.
Query PubChem database for chemical structures, similar compounds, and bioactivity data. Use this skill when: (1) Converting drug name to molecular structure (SMILES, SDF), (2) Finding similar compounds for lead optimization, (3) Querying bioactivity data against protein targets, (4) Getting compounds active in specific assays.