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Report Template

Documents
report-template

Report Template is an Agent Skill for documents published in the Runchuan-BU/BioClaw repository on GitHub: a SKILL.md instruction file an AI agent can load to do this task.

Publication-quality PDF report generation using Typst templates. Produces professional scientific reports with colored section bands, styled tables, figure captions, callout boxes, and page headers/footers.

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QUICK START

How to use this skill

Bring this guide into your coding agent with a prompt tailored to the tool you use.

  1. Open your project in Codex.
  2. Copy and paste the prompt below.
  3. Review files and risks before approving any action.
Prompt to paste
Inspect the Agent Skill at https://github.com/Runchuan-BU/BioClaw/blob/HEAD/container/skills/report-template/SKILL.md and all supporting files. Report provenance, permissions, scripts, dependencies, and security risks. Propose an exact installation into .agents/skills/report-template, but wait for my approval before writing files or running scripts.

Copying this prompt does not install or run the skill. Review third-party files before use.

Report Template System

Generate publication-quality PDF reports using the BioClaw Typst template engine.

Quick Start

import sys
sys.path.insert(0, "/home/node/.claude/skills/report-template")
from report_builder import (
    ReportBuilder, typst_table, typst_callout, typst_image,
    typst_metadata_block, typst_metric_cards, typst_pagebreak,
    typst_text, typst_list, typst_bold, typst_italic,
)

report = ReportBuilder(
    title="My Analysis Report",
    subtitle="Project XYZ",
    author="BioClaw",
)

# Add sections with Typst markup
report.add_section("Background", "Description of the project...")

# Add tables
table = typst_table(
    ["Sample", "Value", "Status"],
    [["A", "92.3", "Pass"], ["B", "87.1", "Pass"]],
    caption="Summary of results",
)
report.add_section("Results", table)

# Compile to PDF
report.compile("output/report.pdf")

Available Components

Tables

typst_table(headers, rows, caption=None)

Callout Boxes

typst_callout(text, title="Note", kind="note")
# kind: "note" (blue), "warning" (yellow), "success" (green), "danger" (red)

Figures

typst_image(path, caption=None, width="100%")
# path is relative to the output directory

Metadata Blocks

typst_metadata_block([("Key", "Value"), ("Date", "2026-04-15")])

Metric Cards

typst_metric_cards([
    {"label": "Samples", "value": "6"},
    {"label": "Quality", "value": "A+"},
])

Text Formatting

typst_text("Plain paragraph")
typst_bold("Bold text")
typst_italic("Italic text")
typst_list(["Item 1", "Item 2"])
typst_enum(["Step 1", "Step 2"])
typst_pagebreak()

Template Features

  • Dark navy section heading bands with white text
  • Teal sub-heading accents
  • Professional page headers and footers with page numbers
  • Alternating-row table styling
  • Four callout box types (note, warning, success, danger)
  • Figure numbering and italic captions
  • Key-value metadata blocks
  • Metric card rows

Requirements

  • Python package: typst (pip install typst)
  • No system dependencies required