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molcell-summary

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Use to write Molecular Cell's Summary — a single unstructured paragraph (~150 words; re-check on the official site) that conveys the molecular question, the mechanism, and its physiological consequence, named and quantified for a molecular-biology readership. Late-stage polish.

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Source SKILL.md: https://github.com/brycewang-stanford/Awesome-Journal-Skills/blob/HEAD/Molecular-Cell-Skills/skills/molcell-summary/SKILL.md

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Summary / Abstract (molcell-summary)

When to trigger

  • Mechanism, framing, and structure are settled (do this late).
  • The abstract reads like a method recap with no molecular mechanism or result.
  • It exceeds the word ceiling, uses subheadings, or is dense with undefined acronyms.
  • It states that something happens but never how at the molecular level.

What Molecular Cell calls it

Molecular Cell's abstract is the Summary: a single, unstructured paragraph (no subheadings, no citations) of roughly ≤150 words (treat as a ceiling; confirm the current cap). It is written for a molecular-biology readership — you can assume familiarity with the process but must still name the mechanism and quantify. It must convey the molecular question, the mechanism, and why it matters physiologically.

Five-move structure (no labels in the text)

  1. Molecular context / stakes (1 sentence) — the process and the step at issue.
  2. Gap / question (1 sentence) — what molecular event was unknown.
  3. What we did + what we found (2–3 sentences) — the mechanism, with the key quantified results and the orthogonal evidence that proves it.
  4. Mechanism stated explicitly — name the molecular cause (residue, base, interface, step), not just the phenotype.
  5. Physiological consequence (1 sentence) — why the mechanism matters in cells/in vivo.

Because Molecular Cell rewards depth, the Summary should make clear the mechanism is established by independent methods, not merely proposed.

Hard constraints

  • ≤ ~150 words (confirm the current cap on the official site).
  • Single paragraph; no subheadings, no citations, no figure/table references.
  • Define any acronym on first use, or avoid it.
  • Names the molecular mechanism explicitly (the how), not only the observation.
  • At least one quantified result (e.g., "10-fold faster," "a 2.9 Å structure," not "significantly").
  • First sentence is legible to a molecular biologist outside the exact subfield.

Jargon blacklist (rewrite on sight)

  • "Herein we report…", "Importantly,", "Interestingly,", "Notably,", "Strikingly,"
  • Strings of ≥2 undefined gene/protein/complex acronyms in one sentence.
  • "elucidate", "delineate", "interrogate", "dissect", "shed light on" as filler verbs.
  • Hedging stacks: "may potentially suggest that it could…".
  • Ending on "further studies are needed" — end on the physiological consequence.

Quantification check

Every effect claim should carry a number somewhere in the paper, and the headline belongs in the Summary: a rate, a fold-change, an affinity, a resolution, an occupancy. A Summary with zero numbers is not finished.

What the in-house editor reads first

Molecular Cell's initial triage is run by professional in-house scientific editors. They decide in minutes whether the paper goes to review, and the Summary plus the title are usually all they read when they decide. Two questions dominate: (1) is there a molecular mechanism here, worked out and validated — or only a phenotype with a proposed cause; and (2) is the mechanism proven by more than one approach. Write the Summary so both answers are visible without the figures. A Summary that names a molecule, a molecular action, and a physiological consequence survives triage; a Summary that lists assays performed does not.

Worked micro-example (before → after)

Before (method recap, no mechanism, no number, 39 words):

Here we studied the helicase XYZ using cryo-EM and biochemistry. We solved several structures and performed unwinding assays. XYZ was important for replication. These findings advance our understanding of DNA replication.

After (mechanism named, quantified, physiological stake, ~85 words):

How replicative helicases couple ATP hydrolysis to strand separation at a stalled fork is unclear. Combining a 2.9 Å cryo-EM structure with single-molecule unwinding, we find that the helicase XYZ grips the lagging strand through a conserved β-hairpin and that hydrolysis at a single subunit ratchets one nucleotide per step. A hairpin point mutant uncouples ATPase from unwinding, slowing fork progression 12-fold and sensitizing cells to replication stress. XYZ thus converts nucleotide hydrolysis into processive, strand-selective translocation that safeguards genome duplication.

The "after" version names the actor (XYZ), the molecular mechanism (β-hairpin grip; single-subunit ratchet), a quantified effect (2.9 Å; 12-fold), orthogonal evidence (structure + single-molecule + mutant), and a physiological consequence.

Output format

【Summary】 single paragraph (word count: N ≤ ~150)
【Five moves present?】 context / gap / approach+result / mechanism named / physiological consequence
【Mechanism explicit?】 yes/no — the named molecular cause
【Quantified headline result?】 yes/no + the number
【Jargon hits removed】 [...]
【Next】 molcell-highlights

Anti-patterns

  • Do not use subheadings or a structured-abstract format — the Summary is one paragraph.
  • Do not describe only the phenomenon; name the molecular mechanism.
  • Do not open with the technique; open with the molecular stake.
  • Do not pad past the ceiling; the limit is a feature.
  • Do not confuse the Summary with the eTOC blurb (that one is third-person and lay; see molcell-highlights).

The ~150-word cap is a working default — confirm against the current Molecular Cell information-for-authors page.